LIFE

The Connectomic Revolution

Topic: 

  • LIFE
https://vimeo.com/251882293

An even more recent and exciting revolution happening now is this connectomic revolution, where we’re able to map in exquisite detail the connections of a part of the brain, and soon even an entire insect brain. It’s giving us absolute answers to questions that we would have debated even just a few years ago; for example, does the insect brain work as an integrated system? And because we now have a draft of a connectome for the full insect brain, we can absolutely answer that question.

The Connectomic Revolution

What the Insect Brain Can Tell Us About Ourselves
[6.12.18]

An even more recent and exciting revolution happening now is this connectomic revolution, where we’re able to map in exquisite detail the connections of a part of the brain, and soon even an entire insect brain. It’s giving us absolute answers to questions that we would have debated even just a few years ago; for example, does the insect brain work as an integrated system? And because we now have a draft of a connectome for the full insect brain, we can absolutely answer that question. That completely changes not just the questions that we’re asking, but our capacity to answer questions. There’s a whole new generation of questions that become accessible.

When I say a connectome, what I mean is an absolute map of the neural connections in a brain. That’s not a trivial problem. It's okay at one level to, for example with a light microscope, get a sense of the structure of neurons, to reconstruct some neurons and see where they go, but knowing which neurons connect with other neurons requires another level of detail. You need electron microscopy to look at the synapses.

ANDREW BARRON is the Australian Research Council Future Fellow and Deputy Head of the Department of Biological Sciences at Macquarie University. He is a neuroethologist with a particular focus on studying the neural mechanisms of honey bees. Andrew Barron's Edge Bio Page

Sexual Double Standards

The Bias Against Understanding the Biological Foundations of Women's Behavior
[5.24.18]

We don’t know enough about important issues that impact women. We don’t know enough about potential side effects of using hormonal contraception. There’s a lot of speculation about it, but most of that speculation is problematic. If you eliminate women’s hormone cycles, what are the implications? That’s an important question. We still don’t know enough about hormone supplements for women later in life. We don’t even know enough about fertility. The data are also problematic. The data on fertility in women’s third, fourth, fifth decades of life are based on ancient records, 200 years old. The statistics that doctors will cite when they are telling women whether they need to see a fertility specialist or not are from a period before modern medicine was really in place, which is outrageous. More recognition of the biological influences on women’s behavior is going to awaken these areas of research, and that will have a positive impact.

MARTIE HASELTON is a professor of psychology and communication studies at UCLA and the Institute for Society and Genetics. She is the author of Hormonal: The Hidden Intelligence of Hormones—How They Drive Desire, Shape Relationships, Influence Our Choices, and Make Us Wiser. Martie Haselton's Edge Bio Page

Sexual Double Standards

Topic: 

  • LIFE
https://vimeo.com/247560716

We don’t know enough about important issues that impact women. We don’t know enough about potential side effects of using hormonal contraception. There’s a lot of speculation about it, but most of that speculation is problematic. If you eliminate women’s hormone cycles, what are the implications? That’s an important question. We still don’t know enough about hormone supplements for women later in life. We don’t even know enough about fertility.

Church Speaks

Topic: 

  • LIFE
https://vimeo.com/250353202

The biggest energy creators in the world, the ones that take solar energy and turn it into a form that’s useful to humans, are these photosynthetic organisms. The cyanobacteria fix [carbon via] light as well or better than land plants. Under ideal circumstances, they can be maybe seven to ten times more productive per photon. . . .

Church Speaks

[2.14.18]

The biggest energy creators in the world, the ones that take solar energy and turn it into a form that’s useful to humans, are these photosynthetic organisms. The cyanobacteria fix [carbon via] light as well or better than land plants. Under ideal circumstances, they can be maybe seven to ten times more productive per photon. . . .

Cyanobacteria turn carbon dioxide, a global warming gas, into carbohydrates and other carbon-containing polymers, which sequester the carbon so that they're no longer global warming gases. They turn it into their own bodies. They do this on such a big scale that about 15 percent of the carbon dioxide in the atmosphere is fixed every year by these cyanobacteria, which is roughly the amount that we’re off from the pre-industrial era. If all of the material that they fix didn’t turn back into carbon dioxide, we’d have solved the global warming problem in a year or two. The reality, however, is that almost as soon as they divide and make baby bacteria, phages break them open, spilling their guts, and they start turning into carbon dioxide. Then all the other things around them start chomping on the bits left over from the phages.

GEORGE CHURCH is professor of genetics at Harvard Medical School, director of the Personal Genome Project, and co-author (with Ed Regis) of Regenesis. George Church's Edge Bio page 

Soul of a Molecular Machine

Topic: 

  • LIFE
https://vimeo.com/212934715

We're at the threshold of a new age of structural biology, where these things that everybody thought were too difficult and would take decades and decades, are all cracking. Now, we're coming to pieces of the cell. The real advance is that you're going to be able to look at all these machines and large molecular complexes inside the cell. It will tell you detailed molecular organization of the cell. That's going to be a big leap, to go from molecules to cells and how cells work.

Soul of a Molecular Machine

[5.1.17]


We're now accumulating data at an incredible rate. I mentioned electron microscopy to study the ribosome—each experiment generates several terabytes of data, which is then massaged, analyzed, and reduced, and finally you get a structure. At least in this data analysis, we believe we know what's happening. We know what the programs are doing, we know what the algorithms are, we know how they come up with the result, and so we feel that intellectually we understand the result. What is now happening in a lot of fields is that you have machine learning, where computers are essentially taught to recognize patterns with deep neural networks. They're formulating rules based on patterns. There are are statistical algorithms that allow them to give weights to various things, and eventually they come up with conclusions.

When they come up with these conclusions, we have no idea how; we just know the general process. If there's a relationship, we don't understand that relationship in the same way that we would if we came up with it ourselves or came up with it based on an intellectual algorithm. So we're in a situation where we're asking, how do we understand results that come from this analysis? This is going to happen more and more as datasets get bigger, as we have genome-wide studies, population studies, and all sorts of things.

We're at the threshold of a new age of structural biology, where these things that everybody thought were too difficult and would take decades and decades, are all cracking. Now we're coming to pieces of the cell. The real advance is that you're going to be able to look at all these machines and large molecular complexes inside the cell. It will tell you detailed molecular organization of the cell. That's going to be a big leap, to go from molecules to cells and how cells work.

In almost every disease, there's a fundamental process that's causing the disease, either a breakdown of a process, or a hijacking of a process, or a deregulation of a process. Understanding these processes in the cell in molecular terms will give us all kinds of ways to treat disease. They'll give us new targets for drugs. They'll give us genetic understanding. The impact on medicine is going to be quite profound over the long-term.

VENKATRAMAN "VENKI" RAMAKRISHNAN is a Nobel Prize-winning biologist whose many scientific contributions include his work on the atomic structure of the ribosome. He is Group Leader and Former Deputy Director of the MRC Laboratory of Molecular Biology in Cambridge, and the current President of the Royal Society. Venki Ramakrishnan's Edge Bio Page

Urban Evolution

Topic: 

  • LIFE
https://vimeo.com/209767757

We realize evolution can occur very rapidly. Yet, despite this realization, very few people have taken the next logical step to consider what's happening around us, where we live. Think about the animals that live just around you. Look out your window in your backyard. . . . All the animals living around us are facing new environments, coping with new food, new structures, new places to hide, and in many cases new temperatures. These are radically different environments.

Urban Evolution

How Species Adapt, or Don't, to City Living
[3.31.17]
We realize evolution can occur very rapidly. Yet, despite this realization, very few people have taken the next logical step to consider what's happening around us, where we live. Think about the animals that live just around you. Look out your window in your backyard. . . . All the animals living around us are facing new environments, coping with new food, new structures, new places to hide, and in many cases new temperatures. These are radically different environments. If, as we now believe, natural selection causes populations to adapt to new conditions, why shouldn't it be happening to those species living around us in the very new conditions?
 
JONATHAN B. LOSOS is the Monique and Philip Lehner Professor for the Study of Latin America and Professor of Organismic and Evolutionary Biology at Harvard University, and Curator in Herpetology at the Museum of Comparative Zoology. He is the author of Improbable Destinies: Fate, Chance, and the Future of EvolutionJonathan B. Losos's Edge Bio Page

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